Protein detail
LST1
Leukocyte-specific transcript 1 protein (Protein B144)
Entry name LST1 | UniProt ID | EVMP score 0.50 |
Frequency 1 | Transmembrane count 1 | Protein classification |
EVMP score: annotation confidence score.
Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information
Protein Names
Leukocyte-specific transcript 1 protein (Protein B144)
Protein Function
Predicted intracellular proteins
Transmembrane
8..28; Helical
Transmembrane Count
1
Ensembl
Entrez Gene Symbol
Frequency
1
EVMP Score
0.50
Fluorescence & Localization
Tissue SpecificbrainCell SpecificAstrocytesSingle-Nuclei Brain Specificastrocyte
Function & Pathway
Protein Function
Predicted intracellular proteins
Cellular Component
Biological Process
Mediation Categories
Clinical-translation mediationFusion and delivery mediationImmune mediationMetabolism mediation
Relations & Evidence
Enzyme-Mediated Modification
0 records.
Ligand-Receptor Signaling
11 records.
| Category | Parent | Database | Transmitter | Receiver | Secreted | Plasma Membrane (Transmembrane) | Plasma Membrane (Peripheral) |
|---|---|---|---|---|---|---|---|
| intracellular | intracellular | ComPPI | No | No | No | No | No |
| intracellular | intracellular | GO_Intercell | No | No | No | No | No |
| intracellular | intracellular | UniProt_location | No | No | No | No | No |
| intracellular | intracellular | OmniPath | No | No | No | No | No |
| transmembrane | transmembrane | UniProt_location | No | No | No | No | No |
| transmembrane | transmembrane | UniProt_topology | No | No | No | No | No |
| transmembrane | transmembrane | UniProt_keyword | No | No | No | No | No |
| transmembrane | transmembrane | LOCATE | No | No | No | No | No |
| transmembrane | transmembrane | Ramilowski_location | No | No | No | No | No |
| transmembrane | transmembrane | OmniPath | No | No | No | No | No |
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Regulatory Interaction Network
0 records.
Protein Complex Composition
0 records.
Sequence, Structure & Domains
Sequences
Length
97
Mass
10,792
Sequence
MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWAQGSSEQELHYASLQRLPVPSSEGPDLRGRDKRGTKEDPRADYACIAENKPT
Alternative Products
Event=Alternative splicing; Named isoforms=13; Comment=Additional isoforms seem to exist.; Name=1; Synonyms=LST1/A; IsoId=O00453-1; Sequence=Displayed; Name=2; Synonyms=LST1/C; IsoId=O00453-2; Sequence=VSP_050578; Name=3; Synonyms=pLst1; IsoId=O00453-3; Sequence=VSP_050579; Name=4; Synonyms=LST1/E; IsoId=O00453-4; Sequence=VSP_050577; Name=5; Synonyms=LST1/K; IsoId=O00453-5; Sequence=VSP_050584; Name=6; Synonyms=LST1/L; IsoId=O00453-6; Sequence=VSP_050583, VSP_050587; Name=7; Synonyms=LST1/J; IsoId=O00453-7; Sequence=VSP_050583, VSP_050586; Name=8; Synonyms=LST1/M; IsoId=O00453-8; Sequence=VSP_050580; Name=9; Synonyms=LST1/N; IsoId=O00453-9; Sequence=VSP_050581, VSP_050582; Name=10; IsoId=O00453-10; Sequence=VSP_050583; Name=11; Synonyms=LST1/P; IsoId=O00453-11; Sequence=VSP_046459; Name=12; IsoId=O00453-12; Sequence=VSP_047367; Name=13; IsoId=O00453-13; Sequence=VSP_050583, VSP_046459
Alternative Sequence
1..46; MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWA -> MT (in isoform 4); 1..45; MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSW -> MIYVSTGAWGWAGSCFWQWSFCPPACVGCIEEHLLSWSQ (in isoform 2); 1..45; MLSRNDDICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSW -> MIYVSTGAWGWAGSCFWQWSFCPPACVGCIEEE (in isoform 3); 7..97; DICIYGGLGLGGLLLLAVVLLSACLCWLHRRVKRLERSWAQGSSEQELHYASLQRLPVPSSEGPDLRGRDKRGTKEDPRADYACIAENKPT -> APSVLVPGPGLLRAGTPLCISAEAASAQQ (in isoform 8); 7..37; Missing (in isoform 6, isoform 7, isoform 10 and isoform 13); 7..13; DICIYGG -> EAASAQQ (in isoform 9); 14..97; Missing (in isoform 9); 38..97; VKRLERSWAQGSSEQELHYASLQRLPVPSSEGPDLRGRDKRGTKEDPRADYACIAENKPT -> APSVLVPGPGLLRAGTPLCISAEAASAQQ (in isoform 12); 38..97; VKRLERSWAQGSSEQELHYASLQRLPVPSSEGPDLRGRDKRGTKEDPRADYACIAENKPT -> GPGLLRAGTPLCISAEAASAQQ (in isoform 5); 45; W -> WHLLSWSQ (in isoform 11 and isoform 13); 46..97; AQGSSEQELHYASLQRLPVPSSEGPDLRGRDKRGTKEDPRADYACIAENKPT -> HLSVLVPGPGLLRAGTPLCISAEAASAQQ (in isoform 7); 46..60; Missing (in isoform 6)
3D Structural Models
Domain & Motif Annotations
Compositional Bias
70..86; Basic and acidic residues
Region
59..97; Disordered
Protein Families
LST1 family
Sequence Similarities
Belongs to the LST1 family.
Clinical Relevance
Drugs