Protein detail

PRIO

Major prion protein (PrP) (ASCR) (PrP27-30) (PrP33-35C) (CD antigen CD230)

Protein symbol
PRIO
UniProt ID
EVMP score
0.88
Frequency
21
Transmembrane count
Protein classification
CD markersDisease related genesHuman disease related genesPlasma proteinsPotential drug targetsPredicted membrane proteinsTransporters
Basic Information
Protein Names
Major prion protein (PrP) (ASCR) (PrP27-30) (PrP33-35C) (CD antigen CD230)
Protein Class
CD markersDisease related genesHuman disease related genesPlasma proteinsPotential drug targetsPredicted membrane proteinsTransporters
Protein Function
  • Human disease related genes:Nervous system diseases:Neurodegenerative diseases
  • CD markers
  • Potential drug targets
  • Transporters:Transporter channels and pores
  • Disease related genes
Entrez Gene Symbol
Gene Synonym
AltPrPCD230CJDGSSPRIPPRP
Gene Description
Prion protein
Chromosome
20
Position
4686350-4701590
Frequency
21
EVMP Score
0.88
Fluorescence & Localization
Tissue Specificskeletal muscleCell SpecificAlveolar cells type 1
Function & Pathway
Protein Function
  • Human disease related genes:Nervous system diseases:Neurodegenerative diseases
  • CD markers
  • Potential drug targets
  • Transporters:Transporter channels and pores
  • Disease related genes
Mediation Categories
Adhesion and uptake mediationClinical-translation mediationFusion and delivery mediationImmune mediationMetabolism mediationReceptor-signaling mediation
Relations & Evidence

Enzyme-Mediated Modification

2 records.

Substrate Gene SymbolEnzyme Gene SymbolEnzyme UniProt IDResidue TypeResidue OffsetModificationDatabaseReferences
PRNPCDK5Q00535S43phosphorylationSparser_ProtMapperPhosphoSitePhosphoSite_ProtMapperProtMapperProtMapper:19587281
PRNPCDK5R1Q15078S43phosphorylationSparser_ProtMapperProtMapperProtMapper:19587281ProtMapper:25572400

Ligand-Receptor Signaling

63 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
adhesionadhesionOmniPathYesYesNoYesYes
cell_adhesioncell_adhesionOmniPathYesYesNoYesYes
cell_adhesioncell_adhesionOmniPathYesYesNoYesYes
transmembranetransmembraneUniProt_locationNoNoNoYesYes
transmembranetransmembraneUniProt_locationNoNoNoYesYes
transmembranetransmembraneUniProt_topologyNoNoNoYesYes
transmembranetransmembraneUniProt_topologyNoNoNoYesYes
transmembranetransmembraneUniProt_keywordNoNoNoYesYes
transmembranetransmembraneUniProt_keywordNoNoNoYesYes
transmembranetransmembraneTopDBNoNoNoYesYes
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Regulatory Interaction Network

1 record.

Source Protein SymbolSource UniProt IDTarget Protein SymbolTarget UniProt IDIs DirectedIs StimulationIs InhibitionDatabaseReferences
CDK5Q00535PRIOP04156YesYesNoiPTMnetSIGNORProtMapperPhosphoSitePhosphoSite_ProtMapperPhosphoSite:25572400SIGNOR:19587281PhosphoSite:24360565

Protein Complex Composition

3 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
PRNP homo-oligomer complexPRNPP041562CORUMPDBPDB:3nhdPDB:3md4PDB:3hesPDB:3md5PDB:7rl4PDB:3nhcPDB:6lniCORUM:2007PDB:3herPDB:7dwvPDB:3heqPDB:6uurPDB:3hj5PDB:4e1hPDB:7un5PDB:4e1iPDB:7rvjPDB:6pq5PDB:7umq16148934
PRNP-ApolopoproteinE3 complexAPOEPRNPP02649P041561:1CompleatCompleat:HC294916764853
PRNP-ApolopoproteinE3 complexPRNPQ13791P04156Q137910:0CORUMCORUM:108816764853

Isolation & Detection Technology

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationUltrafiltration / Tangential Flow FiltrationMass spectrometry137786918
Sequence, Structure & Domains

Sequences

Length
253
Mass
27,661
Sequence
MANLGCWMLVLFVATWSDLGLCKKRPKPGGWNTGGSRYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYERESQAYYQRGSSMVLFSSPPVILLISFLIFLIVG
Alternative Products
Event=Alternative initiation; Named isoforms=2; Name=1; Synonyms=PrP; IsoId=P04156-1; Sequence=Displayed; Name=3; Synonyms=AltPrP; IsoId=F7VJQ1-1; Sequence=External

3D Structural Models

Turn
74..76; 114..117; 171..173; 193..195; 223..225; 228..230
Helix
144..153; 154..156; 166..168
Beta Strand
63..67; 70..73; 79..82; 92..95; 99..101; 109..112; 118..122; 125..127; 128..131; 133..135; 138..140; 141..143; 159..163; 178..181; 182..185; 189..192; 196..202; 205..210; 212..215
3D Structure
Electron microscopy (11); NMR spectroscopy (34); X-ray crystallography (25)

Domain & Motif Annotations

Compositional Bias
52..95; Gly residues
Repeat
51..59; 1; 60..67; 2; 68..75; 3; 76..83; 4; 84..91; 5
Domain (CC)
The normal, monomeric form, PRPN(C), has a mainly alpha-helical structure. Misfolding of this form produces a disease-associated, protease-resistant form, PRPN (Sc), accompanied by a large increase of the beta-sheet content and formation of amyloid fibrils. These fibrils consist of a cross-beta spine, formed by a steric zipper of superposed beta-strands. Disease mutations may favor intermolecular contacts via short beta strands, and may thereby trigger oligomerization. In addition, the heparan-sulfate proteoglycan, GPC1, promotes the association of PRPN (C) to lipid rafts and appears to facilitate the conversion to PRPN (Sc).; DOMAIN: Contains an N-terminal region composed of octamer repeats. At low copper concentrations, the sidechains of His residues from three or four repeats contribute to the binding of a single copper ion. Alternatively, a copper ion can be bound by interaction with the sidechain and backbone amide nitrogen of a single His residue. The observed copper binding stoichiometry suggests that two repeat regions cooperate to stabilize the binding of a single copper ion. At higher copper concentrations, each octamer can bind one copper ion by interactions with the His sidechain and Gly backbone atoms. A mixture of binding types may occur, especially in the case of octamer repeat expansion. Copper binding may stabilize the conformation of this region and may promote oligomerization.
Region
23..230; Interaction with GRB2, ERI3 and SYN1; 23..38; Interaction with ADGRG6; 26..108; Disordered; 51..91; 5 X 8 AA tandem repeats of P-H-G-G-G-W-G-Q
Protein Families
Prion family
Sequence Similarities
Belongs to the prion family.
Clinical Relevance
Disease Involvement
AmyloidosisDisease variant
Drug Targets
Literature-reported target
Interaction Protein
ENSG00000022267ENSG00000103152ENSG00000129195ENSG00000155760ENSG00000163823ENSG00000164251ENSG00000169252ENSG00000169403ENSG00000173846
Interaction Count
9
Interaction Dataset
intact_biogrid