Protein detail

5HT1B

5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (S12) (Serotonin 1D beta receptor) (5-HT-1D-beta) (Serotonin receptor 1B)

Entry name
5HT1B
UniProt ID
EVMP confidence score
0.50
Supporting publications (n)
2
Transmembrane count
7
Protein classification
FDA approved drug targetsG-protein coupled receptorsPredicted membrane proteinsTransporters
EVMP confidence score

Annotation confidence score; open for threshold definitions.

Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information13
Protein Names
5-hydroxytryptamine receptor 1B (5-HT-1B) (5-HT1B) (S12) (Serotonin 1D beta receptor) (5-HT-1D-beta) (Serotonin receptor 1B)
Protein Class (4)
FDA approved drug targetsG-protein coupled receptorsPredicted membrane proteinsTransporters
Protein Function (4)
  • G-protein coupled receptors:Serotonin receptors
  • Transporters
  • FDA approved drug targets:Small molecule drugs
  • G-protein coupled receptors:GPCRs excl olfactory receptors
Transmembrane
47..72; Helical; Name=1; 87..111; Helical; Name=2; 120..145; Helical; Name=3; 166..184; Helical; Name=4; 206..229; Helical; Name=5; 316..337; Helical; Name=6; 348..370; Helical; Name=7
Transmembrane Count
7
Entrez Gene Symbol
Gene Synonym (4)
5-HT1B5-HT1DBHTR1D2S12
Gene Description
5-hydroxytryptamine receptor 1B
Chromosome
6
Position
77460924-77463491
Supporting publications (n)
2
EVMP confidence score
0.50
Fluorescence & Localization3
Cell SpecificBreast myoepithelial cellsSingle-Nuclei Brain Specificlower rhombic lipBlood Cell Specificplasmacytoid DC
Function & Pathway7
Protein Function (4)
  • G-protein coupled receptors:Serotonin receptors
  • Transporters
  • FDA approved drug targets:Small molecule drugs
  • G-protein coupled receptors:GPCRs excl olfactory receptors
Mediation Categories (4)
Clinical-translation mediationFusion and delivery mediationMetabolism mediationReceptor-signaling mediation
Relations & Evidence57

Ligand-Receptor Signaling (49)

49 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
receptorreceptorCellinkerNoYesNoYesNo
receptorreceptorscConnectNoYesNoYesNo
receptorreceptoriTALKNoYesNoYesNo
receptorreceptorAlmen2009NoYesNoYesNo
receptorreceptorCellCellInteractionsNoYesNoYesNo
gpcrreceptorGPCRdbNoYesNoYesNo
5ht_gproteinreceptorHGNCNoYesNoYesNo
receptorreceptorHGNCNoYesNoYesNo
transmembranetransmembrane_predictedPhobiusNoNoNoYesNo
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Regulatory Interaction Network (5)

5 records.

Source Protein SymbolSource UniProt IDTarget Protein SymbolTarget UniProt IDIs DirectedIs StimulationIs InhibitionDatabaseReferences
5HT1BP28222GNA14O95837YesYesNoSIGNORSIGNOR:31160049
5HT1BP28222GNAZP19086YesYesNoSIGNORSIGNOR:31160049
5HT1BP28222GNAI1P63096YesYesNoSIGNORSIGNOR:31160049
5HT1BP28222GNAI3P08754YesYesNoSIGNORSIGNOR:31160049
5HT1BP28222GNAOP09471YesYesNoHINTSIGNORHINT:29925951SIGNOR:31160049

Protein Complex Composition (2)

2 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
HTR1A-HTR1B complexHTR1AHTR1BP08908P282221:1CompleatCORUMCompleat:HC2551CORUM:541611854302
HTR1B homodimer complexHTR1BP282222CORUMPDBCORUM:5415PDB:5v5411854302

Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationImmunoaffinity CaptureMass spectrometry|Western blottingMass spectrometry119837982
Sequence, Structure & Domains12

Sequences

Length
390
Mass
43,568
Sequence
MEEPGAQCAPPPPAGSETWVPQANLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVSECVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGSTSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCTS

3D Structural Models

Turn
337..339
Helix
40..43; 46..76; 78..80; 83..101; 104..112; 118..152; 154..158; 163..181; 206..216; 218..239; 311..336; 349..372; 374..383
3D Structure
Electron microscopy (1); X-ray crystallography (4)

Domain & Motif Annotations

Compositional Bias
259..272; Polar residues
Motif
146..148; DRY motif; important for ligand-induced conformation changes and signaling; 365..369; NPxxY motif; important for ligand-induced conformation changes and signaling
Domain (CC)
Ligands are bound in a hydrophobic pocket formed by the transmembrane helices.; DOMAIN: A residue in the 7th transmembrane region (Thr-355 in human, 'Asn-351' in mouse and rat) is important for species-specific sensitivity to various agonists.
Region
259..281; Disordered
Protein Families
G-protein coupled receptor 1 family
Sequence Similarities
Belongs to the G-protein coupled receptor 1 family.
Clinical Relevance9
Supporting Publications2
PMIDTitleAbstract
36849061Serum exosomes derived from spontaneously hypertensive rats induce cardiac hypertrophy in vitro and in vivo by increasing autocrine release of angiotensin II in cardiomyocytes.No abstract available
37667547Protective effect of small extracellular vesicles (EVs) derived from ACE2-modified human umbilical cord mesenchymal stem cells against renal ischemia-reperfusion injury.No abstract available