Protein detail

TNR8

Tumor necrosis factor receptor superfamily member 8 (CD30L receptor) (Ki-1 antigen) (Lymphocyte activation antigen CD30) (CD antigen CD30)

Entry name
TNR8
UniProt ID
EVMP score
0.38
Frequency
2
Transmembrane count
1
Protein classification
Cancer-related genesCD markersFDA approved drug targetsPlasma proteinsPredicted intracellular proteinsPredicted membrane proteins
EVMP score: annotation confidence score.
Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information
Protein Names
Tumor necrosis factor receptor superfamily member 8 (CD30L receptor) (Ki-1 antigen) (Lymphocyte activation antigen CD30) (CD antigen CD30)
Protein Class
Cancer-related genesCD markersFDA approved drug targetsPlasma proteinsPredicted intracellular proteinsPredicted membrane proteins
Protein Function
  • Cancer-related genes:Candidate cancer biomarkers
  • CD markers
  • Predicted intracellular proteins
  • FDA approved drug targets:Biotech drugs
Transmembrane
386..406; Helical
Transmembrane Count
1
Entrez Gene Symbol
Gene Synonym
CD30D1S166EKI-1
Gene Description
TNF receptor superfamily member 8
Chromosome
1
Position
12063303-12144207
Frequency
2
EVMP Score
0.38
Fluorescence & Localization
Tissue SpecifictestisCell SpecificAlveolar cells type 1
Function & Pathway
Relations & Evidence

Enzyme-Mediated Modification

0 records.

Ligand-Receptor Signaling

67 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
receptorreceptorBaccin2019NoYesNoYesNo
tumor_necrosis_factorreceptorAlmen2009NoYesNoYesNo
tnf_receptorreceptorCellPhoneDBNoYesNoYesNo
cytokinereceptorBaccin2019NoYesNoYesNo
tnf_ngfreceptorHPMRNoYesNoYesNo
tnr8_tnf_ngfreceptorHPMRNoYesNoYesNo
tnfngfreceptorSurfaceomeNoYesNoYesNo
cytokinereceptorICELLNETNoYesNoYesNo
cytokine_tnfreceptorICELLNETNoYesNoYesNo
receptorreceptorOmniPathNoYesNoYesNo
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Regulatory Interaction Network

0 records.

Protein Complex Composition

4 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
CEP57CMC2DPY19L1GMFBNAA20SERPINE1TNFRSF8TRAF3P05121P28908P60983P61599Q13114Q2PZI1Q86XR8Q9NRP20:0:0:0:0:0:0:0hu.MAP2
CEP57DPY19L1NAA20TNFRSF8TRAF3P28908P61599Q13114Q2PZI1Q86XR80:0:0:0:0hu.MAP2
TNFRSF8TRAF2P28908Q129333:6PDBPDB:1d01
CEP57TNFRSF8P28908Q86XR80:0hu.MAP2

Isolation & Detection Technology

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Protein Organic Solvent PrecipitationMass spectrometry132384937
Sequence, Structure & Domains

Sequences

Length
595
Mass
63,747
Sequence
MRVLLAALGLLFLGALRAFPQDRPFEDTCHGNPSHYYDKAVRRCCYRCPMGLFPTQQCPQRPTDCRKQCEPDYYLDEADRCTACVTCSRDDLVEKTPCAWNSSRVCECRPGMFCSTSAVNSCARCFFHSVCPAGMIVKFPGTAQKNTVCEPASPGVSPACASPENCKEPSSGTIPQAKPTPVSPATSSASTMPVRGGTRLAQEAASKLTRAPDSPSSVGRPSSDPGLSPTQPCPEGSGDCRKQCEPDYYLDEAGRCTACVSCSRDDLVEKTPCAWNSSRTCECRPGMICATSATNSCARCVPYPICAAETVTKPQDMAEKDTTFEAPPLGTQPDCNPTPENGEAPASTSPTQSLLVDSQASKTLPIPTSAPVALSSTGKPVLDAGPVLFWVILVLVVVVGSSAFLLCHRRACRKRIRQKLHLCYPVQTSQPKLELVDSRPRRSSTQLRSGASVTEPVAEERGLMSQPLMETCHSVGAAYLESLPLQDASPAGGPSSPRDLPEPRVSTEHTNNKIEKIYIMKADTVIVGTVKAELPEGRGLAGPAEPELEEELEADHTPHYPEQETEPPLGSCSDVMLSVEEEGKEDPLPTAASGK
Alternative Products
Event=Alternative splicing, Alternative initiation; Named isoforms=3; Name=1; Synonyms=Long; IsoId=P28908-1; Sequence=Displayed; Name=2; Synonyms=Cytoplasmic, Short, C30V; IsoId=P28908-2; Sequence=VSP_018900; Name=3; IsoId=P28908-3; Sequence=VSP_055032, VSP_055033
Alternative Sequence
1..463; Missing (in isoform 2); 1..111; Missing (in isoform 3); 446; Missing (in isoform 3)

3D Structural Models

3D Structure
X-ray crystallography (1)

Domain & Motif Annotations

Compositional Bias
179..194; Low complexity; 346..355; Polar residues; 443..452; Polar residues; 499..509; Basic and acidic residues
Repeat
28..66; TNFR-Cys 1; 68..106; TNFR-Cys 2; 107..150; TNFR-Cys 3; 205..241; TNFR-Cys 4; 243..281; TNFR-Cys 5; 282..325; TNFR-Cys 6
Region
167..238; Disordered; 323..355; Disordered; 438..457; Disordered; 485..509; Disordered; 536..595; Disordered
Protein Families
TNFR8 family
Sequence Similarities
Belongs to the TNFR8 family.
Clinical Relevance