Protein detail
LAT1
Large neutral amino acids transporter small subunit 1 (4F2 light chain) (4F2 LC) (4F2LC) (CD98 light chain) (Integral membrane protein E16) (E16) (L-type amino acid transporter 1) (hLAT1) (Solute carrier family 7 member 5) (y+ system cationic amino acid transporter)
Entry name LAT1 | UniProt ID | EVMP confidence score 0.75 |
Supporting publications (n) 66 | Transmembrane count 12 | Protein classification Metabolic proteinsPredicted membrane proteinsTransporters |
Annotation confidence score; open for threshold definitions.
Extremely high >= 0.70High >= 0.60Medium >= 0.40Low >= 0.30Basic Information
Protein Names
Large neutral amino acids transporter small subunit 1 (4F2 light chain) (4F2 LC) (4F2LC) (CD98 light chain) (Integral membrane protein E16) (E16) (L-type amino acid transporter 1) (hLAT1) (Solute carrier family 7 member 5) (y+ system cationic amino acid transporter)
Protein Class (3)
Metabolic proteinsPredicted membrane proteinsTransporters
Protein Function
Transporters:Electrochemical Potential-driven transporters
Transmembrane
50..70; Helical; 84..104; Helical; 127..147; Helical; 170..190; Helical; 193..214; Helical; 243..263; Helical; 277..297; Helical; 325..345; Helical; 370..390; Helical; 396..416; Helical; 431..451; Helical; 458..478; Helical
Transmembrane Count
12
Ensembl
Entrez Gene Symbol
Gene Synonym (5)
CD98D16S469EE16LAT1MPE16
Gene Description
Solute carrier family 7 member 5
Chromosome
16
Position
87830023-87869507
Supporting publications (n)
66
EVMP confidence score
0.75
Fluorescence & Localization
Tissue Specificendometrium 1Cell SpecificDecidual stromal cellsSingle-Nuclei Brain Specificmammillary bodySecretome LocationSecreted in other tissuesSecretome FunctionNo annotated function
Function & Pathway
Protein Function
Transporters:Electrochemical Potential-driven transporters
Cellular Component (12)
- GO:0005765 lysosomal membrane
- GO:0005829 cytosol
- GO:0005886 plasma membrane
- GO:0009925 basal plasma membrane
- GO:0016020 membrane
- GO:0016323 basolateral plasma membrane
- GO:0016324 apical plasma membrane
- GO:0031528 microvillus membrane
- GO:0043231 intracellular membrane-bounded organelle
- GO:0070062 extracellular exosome
Page 1 of 2
Molecular Function (10)
- GO:0005515 protein binding
- GO:0015171 amino acid transmembrane transporter activity
- GO:0015173 aromatic amino acid transmembrane transporter activity
- GO:0015175 neutral L-amino acid transmembrane transporter activity
- GO:0015179 L-amino acid transmembrane transporter activity
- GO:0015190 L-leucine transmembrane transporter activity
- GO:0015196 L-tryptophan transmembrane transporter activity
- GO:0015297 antiporter activity
- GO:0015349 thyroid hormone transmembrane transporter activity
- GO:0042605 peptide antigen binding
Biological Process (3)
Reactome (8)
- R-hsa-210991 basigin interactions
- R-hsa-202733 cell surface interactions at the vascular wall
- R-hsa-109582 hemostasis
- R-hsa-71291 metabolism of amino acids and derivatives
- R-hsa-425407 slc mediated transmembrane transport
- R-hsa-9958863 slc mediated transport of amino acids
- R-hsa-382551 transport of small molecules
- R-hsa-71240 tryptophan catabolism
Canonical Pathways
M12705 Sig cd40pathwaymap
Mediation Categories (4)
Clinical-translation mediationFusion and delivery mediationImmune mediationMetabolism mediation
Relations & Evidence34
Ligand-Receptor Signaling (31)
31 records.
| Category | Parent | Database | Transmitter | Receiver | Secreted | Plasma Membrane (Transmembrane) | Plasma Membrane (Peripheral) |
|---|---|---|---|---|---|---|---|
| apical_cell_membrane | plasma_membrane | Ramilowski_location | Yes | Yes | |||
| plasma_membrane | plasma_membrane | Ramilowski_location | Yes | Yes | |||
| plasma_membrane | plasma_membrane | OmniPath | Yes | Yes | |||
| plasma_membrane_transmembrane | plasma_membrane_transmembrane | CSPA | Yes | Yes | |||
| plasma_membrane_transmembrane | plasma_membrane_transmembrane | OmniPath | Yes | Yes | |||
| secreted | secreted | Cellinker | Yes | Yes | |||
| secreted | secreted | OmniPath | Yes | Yes | |||
| cell_surface | cell_surface | Surfaceome | Yes | Yes | |||
| cell_surface | cell_surface | OmniPath | Yes | Yes | |||
| receptor | receptor | scConnect | Yes | Yes | Yes |
Protein Complex Composition (2)
Isolation & Detection Technology (1)
1 record.
| EV Isolation Method | Detection Method | Number of References | References |
|---|---|---|---|
| Ultracentrifugation | Flow cytometry | 1 | 37862381 |
Sequence, Structure & Domains
Sequences
Length
507
Mass
55,010
Sequence
MAGAGPKRRALAAPAAEEKEEAREKMLAAKSADGSAPAGEGEGVTLQRNITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGALCYAELGTTISKSGGDYAYMLEVYGSLPAFLKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACLCVLLLTAVNCYSVKAATRVQDAFAAAKLLALALIILLGFVQIGKGDVSNLDPNFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINPYRNLPLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGVMSWIIPVFVGLSCFGSVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFTCVMTLLYAFSKDIFSVINFFSFFNWLCVALAIIGMIWLRHRKPELERPIKVNLALPVFFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVWWKNKPKWLLQGIFSTTVLCQKLMQVVPQET
3D Structural Models
Turn
115..117; 157..160; 229..235; 237..239; 253..258; 260..265; 368..370; 473..476
Helix
52..63; 67..70; 72..79; 82..109; 118..124; 127..138; 140..156; 168..188; 190..219; 240..242; 244..252; 270..273; 275..297; 302..306; 311..319; 326..355; 374..386; 387..389; 394..396; 397..421; 435..450; 455..465; 468..472; 483..500
Beta Strand
64..66; 161..164; 224..226; 266..269; 321..323; 363..366
3D Structure
Electron microscopy (21)
Domain & Motif Annotations
Compositional Bias
1..10; Basic residues; 16..27; Basic and acidic residues
Region
1..40; Disordered
Protein Families (2)
- Amino acid-polyamine-organocation (APC) superfamily
- L-type amino acid transporter (LAT) (TC 2.A.3.8) family
Sequence Similarities
Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family.
Clinical Relevance
Drug Targets
Literature-reported target
Drugs (2)
Interaction Protein
ENSG00000168003
Interaction Count
1
Interaction Dataset
intact_biogrid_opencell
Supporting Publications66
| PMID | Title | Related sentences |
|---|---|---|
| 36406491 | Automated Proteomics Sample Preparation of Phosphatidylserine-Positive Extracellular Vesicles from Human Body Fluids. | No related sentences available |
| 37862381 | Surfaceome analysis of extracellular vesicles from senescent cells uncovers uptake repressor DPP4. | Surfaceome analysis of extracellular vesicles from senescent cells uncovers uptake repressor DPP4. |
| 37926697 | Analysis of small EV proteomes reveals unique functional protein networks regulated by VAP-A. | No related sentences available |
| 37947602 | MicroRNA and Protein Cargos of Human Limbal Epithelial Cell-Derived Exosomes and Their Regulatory Roles in Limbal Stromal Cells of Diabetic and Non-Diabetic Corneas. | No related sentences available |
| 38136601 | Identification of Central Nervous System Oncologic Disease Biomarkers in EVs from Cerebrospinal Fluid (CSF) of Pediatric Patients: A Pilot Neuro-Proteomic Study. | No related sentences available |
| 38151470 | Extracellular vesicles from organoid-derived human retinal progenitor cells prevent lipid overload-induced retinal pigment epithelium injury by regulating fatty acid metabolism. | No related sentences available |
| 38225453 | Deep proteomic analysis of obstetric antiphospholipid syndrome by DIA-MS of extracellular vesicle enriched fractions. | No related sentences available |
| 38441169 | Identifying a core protein signature of small extracellular vesicles derived from B-cell precursor acute lymphoblastic leukaemia. | No related sentences available |
| 38490958 | Proteomic analysis of ascitic extracellular vesicles describes tumour microenvironment and predicts patient survival in ovarian cancer. | No related sentences available |
| 38731868 | The Deep Proteomics Approach Identified Extracellular Vesicular Proteins Correlated to Extracellular Matrix in Type One and Two Endometrial Cancer. | No related sentences available |