Protein detail

ARCH

tRNA-splicing ligase-activating factor archease (EC 2.7.7.-) (Zinc finger and BTB domain-containing opposite strand protein 8)

Entry name
ARCH
UniProt ID
EVMP confidence score
0.28
Supporting publications (n)
2
Transmembrane count
Protein classification
Essential proteinsPredicted intracellular proteins
Basic Information
Protein Names
tRNA-splicing ligase-activating factor archease (EC 2.7.7.-) (Zinc finger and BTB domain-containing opposite strand protein 8)
Protein Class (2)
Essential proteinsPredicted intracellular proteins
Protein Function
Predicted intracellular proteins
Entrez Gene Symbol
Gene Synonym
ARCH
Gene Description
Zinc finger and BTB domain containing 8 opposite strand
Chromosome
1
Position
32600172-32650903
Supporting publications (n)
2
EVMP confidence score
0.28
Fluorescence & Localization
Tissue Specifictestis
Function & Pathway
Protein Function
Predicted intracellular proteins
Canonical Pathways (3)
  • M118 Pid integrin a9b1 pathway
  • M165 Pid syndecan 4 pathway
  • M17 Pid notch pathway
Mediation Categories
Other mediation
Relations & Evidence6

Ligand-Receptor Signaling (3)

3 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
intracellularintracellularComPPI
intracellularintracellularGO_Intercell
intracellularintracellularOmniPath

Protein Complex Composition (2)

2 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
tRNA-splicing ligase complexC2orf49DDX1FAM98AFAM98BRTCBRTRAFZBTB8OSQ52LJ0Q8IWT0Q8NCA5Q92499Q9BVC5Q9Y224Q9Y3I01:1:1:1:1:1:1ComplexPortalintact:EBI-2661516821311021248702301475529224608264
PWP1ZBTB8OSQ13610Q8IWT00:0hu.MAP2

Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationSize Exclusion ChromatographyMass spectrometry22898658532089743
Sequence, Structure & Domains

Sequences

Length
167
Mass
19,491
Sequence
MAQEEEDVRDYNLTEEQKAIKAKYPPVNRKYEYLDHTADVQLHAWGDTLEEAFEQCAMAMFGYMTDTGTVEPLQTVEVETQGDDLQSLLFHFLDEWLYKFSADEFFIPREVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENPEVFVIIDI
Alternative Products
Event=Alternative splicing, Alternative initiation; Named isoforms=3; Name=1; IsoId=Q8IWT0-1; Sequence=Displayed; Name=2; IsoId=Q8IWT0-2; Sequence=VSP_024926; Name=3; IsoId=Q8IWT0-3; Sequence=VSP_062690
Alternative Sequence
1; M -> MKGGSRVSNPAVM (in isoform 3); 110..167; EVKVLSIDQRNFKLRSIGWGEEFSLSKHPQGTEVKAITYSAMQVYNEENPEVFVIIDI -> VGRRIFIVQAPSGNRSQSNNIFSNAGL (in isoform 2)

3D Structural Models

3D Structure
X-ray crystallography (6)

Domain & Motif Annotations

Protein Families
Archease family
Sequence Similarities
Belongs to the archease family.
Clinical Relevance
Antibody
Supporting Publications2
PMIDTitleRelated sentences
27894104Proteomic profiling of NCI-60 extracellular vesicles uncovers common protein cargo and cancer type-specific biomarkers.No related sentences available
35611462Extracellular vesicles expressing CEACAM proteins in the urine of bladder cancer patients.No related sentences available