Protein detail

PDCD7

Programmed cell death protein 7 (ES18) (hES18)

Entry name
PDCD7
UniProt ID
EVMP confidence score
0.38
Supporting publications (n)
2
Transmembrane count
Protein classification
Essential proteinsPredicted intracellular proteins
EVMP confidence score

Annotation confidence score; open for threshold definitions.

Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information11
Protein Names
Programmed cell death protein 7 (ES18) (hES18)
Protein Class (2)
Essential proteinsPredicted intracellular proteins
Protein Function
Predicted intracellular proteins
Entrez Gene Symbol
Gene Synonym (3)
59KES18HES18
Gene Description
Programmed cell death 7
Chromosome
15
Position
65117379-65133808
Supporting publications (n)
2
EVMP confidence score
0.38
Fluorescence & Localization6
PDCD7 fluorescence
Tissue Specificskeletal muscleCell SpecificAlveolar cells type 1Single-Nuclei Brain Specifichippocampal CA4Secretome LocationIntracellular and membraneSecretome FunctionImmunity
Function & Pathway5
Relations & Evidence16

Ligand-Receptor Signaling (4)

4 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
intracellularintracellularComPPINoNoNoNoNo
intracellularintracellularGO_IntercellNoNoNoNoNo
intracellularintracellularUniProt_locationNoNoNoNoNo
intracellularintracellularOmniPathNoNoNoNoNo

Protein Complex Composition (11)

11 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
12S U11 snRNPPDCD7PRKRIP1SNRNP25SNRNP35SNRNP48SNRPBSNRPD1SNRPD2SNRPD3SNRPESNRPFSNRPGSRSF7TOE1YBX1P14678P62304P62306P62308P62314P62316P62318P67809Q16560Q16629Q6IEG0Q8N8D1Q96GM8Q9BV90Q9H8751:1:1:1:1:1:1:1:1:1:1:1:1:1:1CompleatCORUMCORUM:1068Compleat:HC347115146077
18S U11/U12 snRNPDHX15PDCD7PRPF8RNPC3SF3B1SF3B2SF3B3SF3B4SF3B5SF3B6SNRNP25SNRNP35SNRNP48SNRPBSNRPD1SNRPD2SNRPD3SNRPESNRPFSNRPGYBX1ZCRB1ZMAT5ZRSR2O43143O75533P14678P62304P62306P62308P62314P62316P62318P67809Q13435Q15393Q15427Q15696Q16560Q6IEG0Q6P2Q9Q8N8D1Q8TBF4Q96LT9Q9BV90Q9BWJ5Q9UDW3Q9Y3B41:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1CompleatCORUMCORUM:430Compleat:HC249715146077
U12-type spliceosomal complexDHX15PDCD7PHF5ARNPC3SF3B1SF3B2SF3B3SF3B4SF3B5SF3B6SNRNP25SNRNP35SNRNP48SNRPBSNRPD1SNRPD2SNRPD3SNRPESNRPFSNRPGYBX1ZCRB1ZMAT5ZRSR2O43143O75533P14678P62304P62306P62308P62314P62316P62318P67809Q13435Q15393Q15427Q15696Q16560Q6IEG0Q7RTV0Q8N8D1Q8TBF4Q96LT9Q9BV90Q9BWJ5Q9UDW3Q9Y3B41:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1:1CompleatCompleat:HC169415146077
CENATACDDX23EFTUD2PDCD7PRP4KPRPF3PRPF31PRPF4PRPF6PRPF8SART1SNRNP200SNRNP25SNRNP35SNRNP40SNRNP48SNRPBSNRPD1SNRPD2SNRPD3SNRPESNRPFSNRPGSNU13TXNL4BUSP39ZMAT5O43172O43290O43395O75643O94906P14678P55769P62304P62306P62308P62314P62316P62318Q13523Q15029Q16560Q53GS9Q6IEG0Q6P2Q9Q86UT8Q8N8D1Q8WWY3Q96DI7Q9BUQ8Q9BV90Q9NX01Q9UDW31:1:1:1:1:3:1:3:3:3:3:3:3:1:1:1:1:1:1:1:1:1:1:1:1:1:1PDBPDB:8y6o
DENND4BPDCD7RNPC3SNRNP35SNRNP48TTC33ZMAT5ZRSR2O75064Q15696Q16560Q6IEG0Q6PID6Q8N8D1Q96LT9Q9UDW30:0:0:0:0:0:0:0hu.MAP2
DENND4BPDCD7RNPC3SNRNP35SNRNP48ZMAT5ZRSR2O75064Q15696Q16560Q6IEG0Q8N8D1Q96LT9Q9UDW30:0:0:0:0:0:0hu.MAP2
EFTUD2PDCD7SNRNP200UBR4USP9XVIRMAYEATS2ZBTB10O75643Q15029Q5T4S7Q69YN4Q8N8D1Q93008Q96DT7Q9ULM30:0:0:0:0:0:0:0Havugimana2012Havugimana2012:C_555
PDCD7SNRNP25SNRNP35SNRNP48SNRPBSNRPD1SNRPD2SNRPD3SNRPESNRPFSNRPGZMAT5P14678P62304P62306P62308P62314P62316P62318Q16560Q6IEG0Q8N8D1Q9BV90Q9UDW31:1:1:1:1:1:1:1:1:1:1:1PDBPDB:9gbwPDB:8r7n
PDCD7SNRNP48SNRPBSNRPD1SNRPD2SNRPD3SNRPESNRPFSNRPGZMAT5P14678P62304P62306P62308P62314P62316P62318Q6IEG0Q8N8D1Q9UDW31:1:1:1:1:1:1:1:1:1PDBPDB:9gc0
PDCD7SNRNP35ZMAT5ZRSR2Q15696Q16560Q8N8D1Q9UDW30:0:0:0hu.MAP
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Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Mass spectrometryR Sequencing0
Sequence, Structure & Domains9

Sequences

Length
485
Mass
54,700
Sequence
MALPPFFGQGRPGPPPPQPPPPAPFGCPPPPLPSPAFPPPLPQRPGPFPGASAPFLQPPLALQPRASAEASRGGGGAGAFYPVPPPPLPPPPPQCRPFPGTDAGERPRPPPPGPGPPWSPRWPEAPPPPADVLGDAALQRLRDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVRARLLRALRLVRRLRGLSQALREAEADGAAWVLLYSQTAPLRAELAERLQPLTQAAYVGEARRRLERVRRRRLRLRERAREREAEREAEAARAVEREQEIDRWRVKCVQEVEEKKREQELKAAADGVLSEVRKKQADTKRMVDILRALEKLRKLRKEAAARKGVCPPASADETFTHHLQRLRKLIKKRSELYEAEERALRVMLEGEQEEERKRELEKKQRKEKEKILLQKREIESKLFGDPDEFPLAHLLEPFRQYYLQAEHSLPALIQIRHDWDQYLVPSDHPKGNFVPQGWVLPPLPSNDIWATAVKLH

3D Structural Models

Turn
229..233
Helix
172..197; 198..200; 202..223; 224..228; 235..285; 292..331; 333..336; 341..383
3D Structure
Electron microscopy (5)

Domain & Motif Annotations

Compositional Bias
12..48; Pro residues; 49..71; Low complexity; 82..96; Pro residues; 109..130; Pro residues
Coiled Coil
232..335; 362..411
Region
1..133; Disordered
Clinical Relevance1
Antibody
Supporting Publications2
PMIDTitleAbstract
27470641Phosphoproteome Characterization of Human Colorectal Cancer SW620 Cell-Derived Exosomes and New Phosphosite Discovery for C-HPP.No abstract available
30865381Surfaceome of Exosomes Secreted from the Colorectal Cancer Cell Line SW480: Peripheral and Integral Membrane Proteins Analyzed by Proteolysis and TX114.No abstract available