Protein detail

ABCB6

ATP-binding cassette sub-family B member 6 (ABC-type heme transporter ABCB6) (EC 7.6.2.5) (Mitochondrial ABC transporter 3) (Mt-ABC transporter 3) (P-glycoprotein-related protein) (Ubiquitously-expressed mammalian ABC half transporter)

Entry name
ABCB6
UniProt ID
Q9NP58
EVMP confidence score
0.38
Supporting publications (n)
1
Transmembrane count
11
Protein classification
Disease related genesEnzymesHuman disease related genesMetabolic proteinsPotential drug targetsPredicted membrane proteinsTransporters
EVMP confidence score

Annotation confidence score; open for threshold definitions.

Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information13
Protein Names
ATP-binding cassette sub-family B member 6 (ABC-type heme transporter ABCB6) (EC 7.6.2.5) (Mitochondrial ABC transporter 3) (Mt-ABC transporter 3) (P-glycoprotein-related protein) (Ubiquitously-expressed mammalian ABC half transporter)
Protein Class (7)
Disease related genesEnzymesHuman disease related genesMetabolic proteinsPotential drug targetsPredicted membrane proteinsTransporters
Protein Function (8)
  • Human disease related genes:Cardiovascular diseases:Hematologic diseases
  • Human disease related genes:Congenital malformations:Congenital malformations of eye
  • Potential drug targets
  • Enzymes
  • ENZYME proteins
  • Human disease related genes:Skin diseases:Skin and soft tissue diseases
  • Transporters:Primary Active Transporters
  • Disease related genes
Transmembrane
27..47; Helical; 73..93; Helical; 107..127; Helical; 148..168; Helical; 186..206; Helical; 264..284; Helical; 292..312; Helical; 376..396; Helical; 398..418; Helical; 500..520; Helical; 530..550; Helical
Transmembrane Count
11
Ensembl
ENSG00000115657
Entrez Gene Symbol
ABCB6
Gene Synonym (3)
EST45597MTABC3umat
Gene Description
ATP binding cassette subfamily B member 6 (Langereis blood group)
Chromosome
2
Position
219209772-219218994
Supporting publications (n)
1
EVMP confidence score
0.38
Fluorescence & Localization5
ABCB6 fluorescence
Tissue SpecificbrainCell SpecificBrain excitatory neuronsBlood Cell SpecificgdT-cellBlood Lineage SpecificB-cells
Function & Pathway8
Protein Function (8)
  • Human disease related genes:Cardiovascular diseases:Hematologic diseases
  • Human disease related genes:Congenital malformations:Congenital malformations of eye
  • Potential drug targets
  • Enzymes
  • ENZYME proteins
  • Human disease related genes:Skin diseases:Skin and soft tissue diseases
  • Transporters:Primary Active Transporters
  • Disease related genes
Cellular Component (19)
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Molecular Function (7)
Biological Process (3)
KEGG
hsa02010 ABC transporters
Reactome (4)
Canonical Pathways
M174 Pid upa upar pathway
Mediation Categories (3)
Clinical-translation mediationFusion and delivery mediationMetabolism mediation
Relations & Evidence27

Ligand-Receptor Signaling (21)

21 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
transmembranetransmembrane_predictedPhobiusNoNoYesNoNo
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Protein Complex Composition (5)

5 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
ABCB6CYLC2DUSP11EIF1BEIF2S1EIF2S2EIF2S3EIF3BEIF3CLEIF3GEIF3IEIF3JEIF5SLTMUBCB5ME19O60739O75319O75821O75822P05198P0CG48P20042P41091P55010P55884Q13347Q14093Q9NP58Q9NWH91:1:1:1:1:1:1:1:1:1:1:1:1:1:1NetworkBlastCompleatCompleat:HC5926
ABCB6MTHFD1NEMFPA2G4RPL11RPL18RPL26L1RPL36RPL8RPLP0RPLP2UBCO60524P05387P05388P0CG48P11586P62913P62917Q07020Q9NP58Q9UNX3Q9UQ80Q9Y3U81:1:1:1:1:1:1:1:1:1:1:1NetworkBlastCompleatCompleat:HC4244
ABCB6BAK1NIPBLSFXN1TIMM50TOMM20TOMM22TOMM40TOMM7TOMM70O94826O96008Q15388Q16611Q3ZCQ8Q6KC79Q9H9B4Q9NP58Q9NS69Q9P0U10:0:0:0:0:0:0:0:0:0Havugimana2012Havugimana2012:C_591
ABCB6MRAP2SLC25A38TEX2Q8IWB9Q96DW6Q96G30Q9NP580:0:0:0hu.MAP2
ABCB6Q9NP582PDBPDB:7ekmPDB:8k7bPDB:7eklPDB:7dnzPDB:7d7rPDB:7d7nPDB:9dbqPDB:8yr4PDB:7dnyPDB:8fwkPDB:8yr3PDB:8k7c

Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationMass spectrometry23180595838207106
Sequence, Structure & Domains14

Sequences

Length
842
Mass
93,886
Sequence
MVTVGNYCEAEGPVGPAWMQDGLSPCFFFTLVPSTRMALGTLALVLALPCRRRERPAGADSLSWGAGPRISPYVLQLLLATLQAALPLAGLAGRVGTARGAPLPSYLLLASVLESLAGACGLWLLVVERSQARQRLAMGIWIKFRHSPGLLLLWTVAFAAENLALVSWNSPQWWWARADLGQQVQFSLWVLRYVVSGGLFVLGLWAPGLRPQSYTLQVHEEDQDVERSQVRSAAQQSTWRDFGRKLRLLSGYLWPRGSPALQLVVLICLGLMGLERALNVLVPIFYRNIVNLLTEKAPWNSLAWTVTSYVFLKFLQGGGTGSTGFVSNLRTFLWIRVQQFTSRRVELLIFSHLHELSLRWHLGRRTGEVLRIADRGTSSVTGLLSYLVFNVIPTLADIIIGIIYFSMFFNAWFGLIVFLCMSLYLTLTIVVTEWRTKFRRAMNTQENATRARAVDSLLNFETVKYYNAESYEVERYREAIIKYQGLEWKSSASLVLLNQTQNLVIGLGLLAGSLLCAYFVTEQKLQVGDYVLFGTYIIQLYMPLNWFGTYYRMIQTNFIDMENMFDLLKEETEVKDLPGAGPLRFQKGRIEFENVHFSYADGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNIRYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANRTTIVVAHRLSTVVNADQILVIKDGCIVERGRHEALLSRGGVYADMWQLQQGQEETSEDTKPQTMER
Alternative Products
Event=Alternative splicing; Named isoforms=2; Name=1; IsoId=Q9NP58-1; Sequence=Displayed; Name=2; IsoId=Q9NP58-4; Sequence=VSP_021973
Alternative Sequence
183..228; Missing (in isoform 2)

3D Structural Models

Turn
725..727
Helix
238..253; 259..294; 299..316; 325..355; 358..363; 366..389; 391..408; 411..458; 460..466; 469..521; 527..541; 542..546; 547..549; 561..572; 628..636; 654..656; 659..664; 680..685; 693..702; 706..711; 715..717; 722..724; 729..743; 759..773; 785..789; 808..814; 817..826
Beta Strand
319..322; 590..600; 601..603; 604..613; 618..625; 643..649; 666..669; 677..679; 689..691; 712..714; 719..721; 746..751; 753..757; 776..781; 792..798; 801..806
3D Structure
Electron microscopy (12); X-ray crystallography (4)

Domain & Motif Annotations

Domain (CC)
Contains two independently folding units, the N-terminal transmembrane domain (residues 1-205) and the ABC-core domain (206-842) are respectively responsible for the lysosomal targeting and the ATPase activity.
Domain (FT)
265..556; ABC transmembrane type-1; 590..824; ABC transporter
Region
1..236; Required for ATPase activity; 1..205; Required for the lysosomal targeting
Protein Families (3)
  • ABC transporter superfamily
  • ABCB family
  • Heavy Metal importer (TC 3.A.1.210) subfamily
Sequence Similarities
Belongs to the ABC transporter superfamily. ABCB family. Heavy Metal importer (TC 3.A.1.210) subfamily.
Clinical Relevance2
Disease Involvement (3)
Disease variantDyskeratosis congenitaMicrophthalmia
Antibody (2)
HPA046723HPA058011
Supporting Publications1
PMIDTitleAbstract
32916986Proteomic Approach for Searching for Universal, Tissue-Specific, and Line-Specific Markers of Extracellular Vesicles in Lung and Colorectal Adenocarcinoma Cell Lines.No abstract available