Protein detail

GBRA5

Gamma-aminobutyric acid receptor subunit alpha-5 (GABA(A) receptor subunit alpha-5) (GABAAR subunit alpha-5)

Entry name
GBRA5
UniProt ID
EVMP confidence score
0.50
Supporting publications (n)
1
Transmembrane count
4
Protein classification
EVMP confidence score

Annotation confidence score; open for threshold definitions.

Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information8
Protein Names
Gamma-aminobutyric acid receptor subunit alpha-5 (GABA(A) receptor subunit alpha-5) (GABAAR subunit alpha-5)
Protein Function (5)
  • Predicted intracellular proteins
  • Human disease related genes:Nervous system diseases:Epilepsy
  • Transporters:Transporter channels and pores
  • Disease related genes
  • FDA approved drug targets:Small molecule drugs
Transmembrane
261..281; Helical; 287..308; Helical; 319..340; Helical; 428..448; Helical
Transmembrane Count
4
Entrez Gene Symbol
Supporting publications (n)
1
EVMP confidence score
0.50
Fluorescence & Localization3
Tissue SpecifickidneyCell SpecificProximal tubule cellsSingle-Nuclei Brain Specificastrocyte
Function & Pathway8
Protein Function (5)
  • Predicted intracellular proteins
  • Human disease related genes:Nervous system diseases:Epilepsy
  • Transporters:Transporter channels and pores
  • Disease related genes
  • FDA approved drug targets:Small molecule drugs
Canonical Pathways (3)
  • M47 Pid integrin cs pathway
  • M67 Pid arf6 trafficking pathway
  • M18 Pid integrin1 pathway
Mediation Categories (3)
Clinical-translation mediationFusion and delivery mediationReceptor-signaling mediation
Relations & Evidence41

Ligand-Receptor Signaling (35)

35 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
channelstransporterSurfaceomeNoYesNoNoNo
ion_channelion_channelDGIdbNoYesNoNoNo
ion_channelion_channelAlmen2009NoYesNoNoNo
ligand_gatedion_channelAlmen2009NoYesNoNoNo
ligand_gatedion_channelSurfaceomeNoYesNoNoNo
transportertransporterOmniPathNoYesNoNoNo
ion_channelion_channelOmniPathNoYesNoNoNo
transmembranetransmembraneUniProt_locationNoNoNoNoNo
transmembranetransmembraneUniProt_topologyNoNoNoNoNo
transmembranetransmembraneUniProt_keywordNoNoNoNoNo
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Regulatory Interaction Network (1)

1 record.

Source Protein SymbolSource UniProt IDTarget Protein SymbolTarget UniProt IDIs DirectedIs StimulationIs InhibitionDatabaseReferences
PCD19Q8TAB3GBRA5P31644YesYesNoSIGNORSIGNOR:29360992

Protein Complex Composition (4)

4 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
GABA-A (a5-b1-g2) receptorGABRA5GABRB1GABRG2P18505P18507P316442:1:2SIGNORComplexPortalSIGNOR:SIGNOR-C335intact:EBI-484399293060789914755292282328651879087437892178
GABA-A receptoralpha5-beta2-gamma2GABRA5GABRB2GABRG2P18507P31644P478701:2:2ComplexPortalintact:EBI-4842390830607899282328651475529237892178
GABRA5GABRG2P18507P316441:4PDBPDB:8bhg
GABRA5P316445PDBPDB:5ojmPDB:8bgiPDB:8bhoPDB:8bhsPDB:8bhbPDB:5o8fPDB:8bejPDB:8bhqPDB:8bhkPDB:8bhiPDB:8bhrPDB:8bhaPDB:8bhm

Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationUltrafiltration / Tangential Flow FiltrationSize Exclusion ChromatographyMass spectrometry438871114380373003857600239996590
Sequence, Structure & Domains11

Sequences

Length
462
Mass
52,146
Sequence
MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKREVILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK

3D Structural Models

Turn
66..70; 89..92; 125..127; 178..181; 198..200; 217..219; 345..347
Helix
46..57; 107..109; 122..124; 258..263; 265..276; 277..280; 286..309; 319..344; 421..449
Beta Strand
73..88; 93..105; 114..120; 133..135; 138..143; 146..148; 150..156; 160..172; 184..187; 190..195; 201..205; 208..210; 212..215; 223..239; 242..255
3D Structure
Electron microscopy (11); X-ray crystallography (4)

Domain & Motif Annotations

Domain (CC)
GABAARs subunits share a common topological structure: a peptide sequence made up of a long extracellular N-terminal, four transmembrane domains, intracellular or cytoplasmic domain located between the third and the fourth transmembrane domains.
Region
377..412; Disordered
Protein Families (3)
  • Ligand-gated ion channel (TC 1.A.9) family
  • Gamma-aminobutyric acid receptor (TC 1.A.9.5) subfamily
  • GABRA5 sub-subfamily
Sequence Similarities
Belongs to the ligand-gated ion channel (TC 1.A.9) family. Gamma-aminobutyric acid receptor (TC 1.A.9.5) subfamily. GABRA5 sub-subfamily.
Clinical Relevance3
Biomarker
Phase 2; Phase 1; Approved; Investigative
Supporting Publications1
PMIDTitleAbstract
37588411Src family kinases engage differential pathways for encapsulation into extracellular vesicles.No abstract available