Protein detail

CIB1

Calcium and integrin-binding protein 1 (CIB) (Calcium- and integrin-binding protein) (CIBP) (Calmyrin) (DNA-PKcs-interacting protein) (Kinase-interacting protein) (KIP) (SNK-interacting protein 2-28) (SIP2-28)

Entry name
CIB1
UniProt ID
EVMP confidence score
0.72
Supporting publications (n)
17
Transmembrane count
Protein classification
Disease related genesHuman disease related genesPotential drug targetsPredicted intracellular proteinsTransporters
EVMP confidence score

Annotation confidence score; open for threshold definitions.

Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information11
Protein Names
Calcium and integrin-binding protein 1 (CIB) (Calcium- and integrin-binding protein) (CIBP) (Calmyrin) (DNA-PKcs-interacting protein) (Kinase-interacting protein) (KIP) (SNK-interacting protein 2-28) (SIP2-28)
Protein Class (5)
Disease related genesHuman disease related genesPotential drug targetsPredicted intracellular proteinsTransporters
Protein Function (5)
  • Predicted intracellular proteins
  • Potential drug targets
  • Human disease related genes:Skin diseases:Skin and soft tissue diseases
  • Transporters:Accessory Factors Involved in Transport
  • Disease related genes
Entrez Gene Symbol
Gene Synonym (3)
CIBKIPSIP2-28
Gene Description
Calcium and integrin binding 1
Chromosome
15
Position
90229975-90234047
Supporting publications (n)
17
EVMP confidence score
0.72
Fluorescence & Localization1
CIB1 fluorescence
Function & Pathway5
Relations & Evidence20

Enzyme-Mediated Modification (1)

1 record.

Substrate Gene SymbolEnzyme Gene SymbolEnzyme UniProt IDResidue TypeResidue OffsetModificationDatabaseReferences
CIB1PRKD2Q9BZL6S78phosphorylationPhosphoSitePhosphoSite_ProtMapperProtMapper

Ligand-Receptor Signaling (11)

11 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
intracellularintracellularComPPINoNoNoNoNo
intracellularintracellularGO_IntercellNoNoNoNoNo
intracellularintracellularUniProt_locationNoNoNoNoNo
intracellularintracellularOmniPathNoNoNoNoNo
adhesion_cytoskeleton_adaptorintracellular_intercellular_relatedAdhesomeYesNoNoNoNo
intracellular_intercellular_relatedintracellular_intercellular_relatedOmniPathYesNoNoNoNo
plasma_membraneplasma_membraneUniProt_locationNoNoNoNoNo
apical_cell_membraneplasma_membraneUniProt_locationNoNoNoNoNo
apical_cell_membraneplasma_membraneRamilowski_locationNoNoNoNoNo
plasma_membraneplasma_membraneRamilowski_locationNoNoNoNoNo
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Regulatory Interaction Network (5)

5 records.

Source Protein SymbolSource UniProt IDTarget Protein SymbolTarget UniProt IDIs DirectedIs StimulationIs InhibitionDatabaseReferences
CIB1Q99828COMPLEX:P05106_P08514YesNoYesSIGNORSIGNOR:16418530
CHIPQ9UNE7CIB1Q99828YesNoYesSIGNORSIGNOR:33082516
CIB1Q99828ITA2BP08514YesYesNoMPPISIGNORHPRDHINTLMPIDLit-BM-17HINT:9030514LMPID:20034469LMPID:9030514HPRD:9030514Lit-BM-17:9030514HINT:10358085MPPI:10358085SIGNOR:11756406
RAC3P60763CIB1Q99828YesYesNoHPRDLit-BM-17SIGNORHPRD:11756406Lit-BM-17:11756406SIGNOR:11756406
KPCD2Q9BZL6CIB1Q99828YesNoNoiPTMnetPhosphoSitePhosphoSite_ProtMapperProtMapperPhosphoSite:23503467

Protein Complex Composition (2)

2 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
CIB1TMC7Q7Z402Q998280:0hu.MAP2
CIB1Q998282PDBPDB:6od0PDB:6ocxPDB:1y1aPDB:1xo5

Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationSize Exclusion ChromatographyImmunoaffinity CaptureWestern blottingR SequencingSmall R sequencing (Illumi HiSeq 2000)ELISA426775013410734014009834637922300
Sequence, Structure & Domains11

Sequences

Length
191
Mass
21,703
Sequence
MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKIVL
Alternative Products
Event=Alternative splicing; Named isoforms=2; Name=1; IsoId=Q99828-1; Sequence=Displayed; Name=2; Synonyms=CIB1a; IsoId=Q99828-2; Sequence=VSP_053740
Alternative Sequence
29; L -> LSVYVVLAPHLVDNEQQARSGNEHTGRPIAENTDSSPLSTR (in isoform 2)

3D Structural Models

Turn
18..20; 49..51
Helix
14..16; 24..35; 40..42; 45..48; 55..58; 62..65; 70..77; 88..98; 104..115; 125..136; 146..160; 170..178; 181..190
Beta Strand
81..86; 120..123; 137..139; 165..168
3D Structure
NMR spectroscopy (5); X-ray crystallography (4)

Domain & Motif Annotations

Domain (CC)
The EF-hands may also bind magnesium ions in the presence of high Mg(2+) levels and low Ca(2+) levels.
Domain (FT)
103..138; EF-hand 1; 148..183; EF-hand 2
Clinical Relevance4
Interaction Protein (2)
ENSG00000143801ENSG00000197442
Interaction Count
2
Interaction Dataset
intact_biogrid
Supporting Publications17
PMIDTitleAbstract
38113368In-Depth Proteome Profiling of Small Extracellular Vesicles Isolated from Cancer Cell Lines and Patient Serum.No abstract available
38207106Proteomic, Metabolomic, and Fatty Acid Profiling of Small Extracellular Vesicles from Glioblastoma Stem-Like Cells and Their Role in Tumor Heterogeneity.No abstract available
38891077Altered Extracellular Vesicle-Derived Protein and microRNA Signatures in Bronchoalveolar Lavage Fluid from Patients with Chronic Obstructive Pulmonary Disease.No abstract available
39001700Optimized AF4 combined with density cushion ultracentrifugation enables profiling of high-purity human blood extracellular vesicles.No abstract available
40189497Small extracellular vesicle-based one-step high-throughput microfluidic platform for epithelial ovarian cancer diagnosis.No abstract available
41068253Identification of plasma extracellular vesicle protein biomarkers in diabetic retinopathy progression.No abstract available
41307968Extracellular Vesicles Define Discrete Nano-Based Niches Within the Human Haematopoietic System.No abstract available
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