Protein detail

PFD1

Prefoldin subunit 1

Entry name
PFD1
UniProt ID
EVMP confidence score
0.75
Supporting publications (n)
43
Transmembrane count
Protein classification
Essential proteinsPredicted intracellular proteinsPredicted membrane proteins
EVMP confidence score

Annotation confidence score; open for threshold definitions.

Extremely high >= 0.85High >= 0.70Medium >= 0.55Low >= 0.40
Basic Information11
Protein Names
Prefoldin subunit 1
Protein Class (3)
Essential proteinsPredicted intracellular proteinsPredicted membrane proteins
Protein Function
Predicted intracellular proteins
Entrez Gene Symbol
Gene Synonym
PFD1
Gene Description
Prefoldin subunit 1
Chromosome
5
Position
140245035-140303113
Supporting publications (n)
43
EVMP confidence score
0.75
Fluorescence & Localization2
Tissue SpecificbrainCell SpecificEndometrial luminal cells
Function & Pathway6
Relations & Evidence14

Ligand-Receptor Signaling (3)

3 records.

CategoryParentDatabaseTransmitterReceiverSecretedPlasma Membrane (Transmembrane)Plasma Membrane (Peripheral)
intracellularintracellularComPPINoNoNoNoNo
intracellularintracellularGO_IntercellNoNoNoNoNo
intracellularintracellularOmniPathNoNoNoNoNo

Protein Complex Composition (10)

10 records.

Component NameComponent Gene SymbolsComponent UniProt IDStoichiometryDatabaseDatabase IDsReferences
Prefoldin co-chaperonePFDN1PFDN2PFDN4PFDN5PFDN6VBP1O15212O60925P61758Q99471Q9NQP4Q9UHV91:1:1:1:1:1SIGNORCORUMComplexPortalCompleathu.MAP2SIGNOR:SIGNOR-C513Compleat:HC72CORUM:33intact:EBI-2582510631738558946337412456645146340021475529232699605
Prefoldin co-chaperone complexPDRG1PFDN1PFDN2PFDN5PFDN6VBP1O15212O60925P61758Q99471Q9NUG6Q9UHV91:1:1:1:1:1ComplexPortal3476119114755292384985263853201432699605
prefoldin complexPDRG1PFDN1PFDN2PFDN4PFDN5PFDN6SLMAPURI1UXTVBP1O15212O60925O94763P61758Q14BN4Q99471Q9NQP4Q9NUG6Q9UBK9Q9UHV91:1:1:1:1:1:1:1:1:1CompleatCompleat:HC119630229
DNAAF10MARCHF9PDRG1PFDN1PFDN2PFDN4PFDN5PFDN6PIH1D1RPAP3TIPARPURI1UXTVBP1O15212O60925O94763P61758Q7Z3E1Q86YJ5Q96MX6Q99471Q9H6T3Q9NQP4Q9NUG6Q9NWS0Q9UBK9Q9UHV90:0:0:0:0:0:0:0:0:0:0:0:0:0hu.MAP2
ABL1NUBP2PDRG1PFDN1PFDN2PFDN4PFDN5PFDN6PPP1R14BVBP1O15212O60925P00519P61758Q96C90Q99471Q9NQP4Q9NUG6Q9UHV9Q9Y5Y20:0:0:0:0:0:0:0:0:0Havugimana2012Havugimana2012:C_586
CCT2CCT3CCT4CCT5CCT6ACCT7CCT8PFDN1PFDN2PFDN4PFDN5PFDN6TCP1VBP1O15212O60925P17987P40227P48643P49368P50990P50991P61758P78371Q99471Q99832Q9NQP4Q9UHV91:1:2:2:2:2:2:2:1:2:1:2:1:1PDBPDB:6nr8PDB:6nrbPDB:7wu7PDB:6nrcPDB:6nr9PDB:6nrd
AOX1LMNB2PFDN1PFDN2PFDN4PFDN5PFDN6VBP1O15212O60925P61758Q03252Q06278Q99471Q9NQP4Q9UHV90:0:0:0:0:0:0:0hu.MAP
MARCHF9PFDN1PFDN2PFDN4PFDN5PFDN6TIPARPVBP1O15212O60925P61758Q7Z3E1Q86YJ5Q99471Q9NQP4Q9UHV90:0:0:0:0:0:0:0hu.MAP2
AOX1LMNB2PFDN1PFDN4PFDN5PFDN6O15212O60925Q03252Q06278Q99471Q9NQP40:0:0:0:0:0hu.MAP
MEF2CMEF2DPFDN1SNX5USF2O60925Q06413Q14814Q15853Q9Y5X31:1:1:1:1NetworkBlastCompleatCompleat:HC8682

Isolation & Detection Technology (1)

1 record.

EV Isolation MethodDetection MethodNumber of ReferencesReferences
Differential UltracentrifugationMass spectrometry128986585
Sequence, Structure & Domains6

Sequences

Length
122
Mass
14,210
Sequence
MAAPVDLELKKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFILQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREMLMARRAQ

3D Structural Models

3D Structure
Electron microscopy (6)

Domain & Motif Annotations

Protein Families
Prefoldin subunit beta family
Sequence Similarities
Belongs to the prefoldin subunit beta family.
Clinical Relevance4
Antibody
Interaction Protein (11)
ENSG00000101132ENSG00000108262ENSG00000123349ENSG00000131653ENSG00000132305ENSG00000140395ENSG00000140854ENSG00000143256ENSG00000155959ENSG00000172354ENSG00000204220
Interaction Count
11
Interaction Dataset (4)
biogrid_bioplexintact_biogridintact_biogrid_bioplexbiogrid_opencell_bioplex
Supporting Publications43
PMIDTitleAbstract
30646616Preferential Localization of MUC1 Glycoprotein in Exosomes Secreted by Non-Small Cell Lung Carcinoma Cells.THBS1, ANXA6, HIST1H4A, COL18A1, MDK, SRGN, ENO1, TUBA4A, SLC3A2, GPI, MIF, MUC1, TALDO1, SLC7A5, ICAM1, HSP90AA1, G6PD, and LRP1 were found to be expressed in exosomes at more than 5-fold higher level as compared to total cellular membrane proteins.
30760538Microvesicle Proteomic Profiling of Uterine Liquid Biopsy for Ovarian Cancer Early Detection.No abstract available
30950185Unique Protein Profiles of Extracellular Vesicles as Diagnostic Biomarkers for Early and Advanced Non-Small Cell Lung Cancer.No abstract available
31196968Cancer Cell Derived Small Extracellular Vesicles Contribute to Recipient Cell Metastasis Through Promoting HGF/c-Met Pathway.No abstract available
31320591Exosomes regulate neurogenesis and circuit assembly.No abstract available
31508500Proteomic profiling of extracellular vesicles allows for human breast cancer subtyping.No abstract available
32089743Human umbilical cord mesenchymal stromal cells-derived extracellular vesicles exert potent bone protective effects by CLEC11A-mediated regulation of bone metabolism.No abstract available
32795414Extracellular Vesicle and Particle Biomarkers Define Multiple Human Cancers.Among traditional exosome markers, CD9, HSPA8, ALIX, and HSP90AB1 represent pan-EVP markers, while ACTB, MSN, and RAP1B are novel pan-EVP markers.
33035814Knockout of PRDX6 induces mitochondrial dysfunction and cell cycle arrest at G2/M in HepG2 hepatocarcinoma cells.No abstract available
33114768Proteomic Profiling of Two Distinct Populations of Extracellular Vesicles Isolated from Human Seminal Plasma.No abstract available
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